Commit Graph

5 Commits

Author SHA1 Message Date
Tyler-Tran
c55d2e7ba3 Adding shrinking flag for cover and fastcover (#1656)
* Changed ERROR(GENERIC) excluding inits

* editing git ignore

* Edited init functions to size_t returns

* moved declarations earlier

* resolved issues with changes to init functions

* fixed style and an error check

* attempting to add tests that might trigger changes

* added && die to cases expecting to fail

* resolved no die on expected failed command

* fixed accel to be incorrect value

* Adding an automated shrinking option

* Fixing build

* finalizing fixes

* fix?

* Removing added comment in cover.h

* Styling fixes

* Merging with fb dev

* removing megic number for default regression

* Requested revisions

* fixing support for fast cover

* fixing casting errors

* parenthesis fix

* fixing some build nits

* resolving travis ci syntax

* might resolve all compilation issues

* removed unused variable

* remodeling the selectDict function

* fixing bad memory access

* fixing error checks

* fixed erroring check in selectDict

* fixing mixed declarations

* modify mixed declaration

* fixing nits and adding test cases

* Adding requested changes + fixed bug for error checking

* switched double comparison from != to <

* fixed declaration typing

* refactoring COVER_best_finish() and changing shrinkDict

* removing the const's

* modifying ZDICT_optimizeTrainFromBuffer_cover functions

* fixing potential bad memcpy

* fixing the error function for dict size
2019-06-27 16:26:57 -07:00
Josh Soref
a880ca239b Spelling (#1582)
* spelling: accidentally

* spelling: across

* spelling: additionally

* spelling: addresses

* spelling: appropriate

* spelling: assumed

* spelling: available

* spelling: builder

* spelling: capacity

* spelling: compiler

* spelling: compressibility

* spelling: compressor

* spelling: compression

* spelling: contract

* spelling: convenience

* spelling: decompress

* spelling: description

* spelling: deflate

* spelling: deterministically

* spelling: dictionary

* spelling: display

* spelling: eliminate

* spelling: preemptively

* spelling: exclude

* spelling: failure

* spelling: independence

* spelling: independent

* spelling: intentionally

* spelling: matching

* spelling: maximum

* spelling: meaning

* spelling: mishandled

* spelling: memory

* spelling: occasionally

* spelling: occurrence

* spelling: official

* spelling: offsets

* spelling: original

* spelling: output

* spelling: overflow

* spelling: overridden

* spelling: parameter

* spelling: performance

* spelling: probability

* spelling: receives

* spelling: redundant

* spelling: recompression

* spelling: resources

* spelling: sanity

* spelling: segment

* spelling: series

* spelling: specified

* spelling: specify

* spelling: subtracted

* spelling: successful

* spelling: return

* spelling: translation

* spelling: update

* spelling: unrelated

* spelling: useless

* spelling: variables

* spelling: variety

* spelling: verbatim

* spelling: verification

* spelling: visited

* spelling: warming

* spelling: workers

* spelling: with
2019-04-12 11:18:11 -07:00
Nick Terrell
e649fad7aa [dictBuilder] Fix displayLevel for corpus warning
Pass the displaylevel into the corpus warning, because it is used in
fast cover and cover, so it needs to respect the local level.
2019-04-08 20:00:18 -07:00
Nick Terrell
d0f5ba36fb [cover] Improvements for small or homogeneous data
* The algorithm would bail as soon as it found one epoch that
  contained no new segments. Change it so it now has to fail
  >= 10 times in a row (10 for fastcover, 10-100 for cover).
* The algorithm uses the `maxDict` size to decide the epoch size.
  When this size is absurdly large, it causes tiny epochs. Lower
  bound the epoch size at 10x the segment size, and warn the user
  that their training set is too small.

Fixes #1554
2019-03-22 14:14:46 -07:00
Jennifer Liu
9d6ed9def3 Merge fastCover into DictBuilder (#1274)
* Minor fix

* Run non-optimize FASTCOVER 5 times in benchmark

* Merge fastCover into dictBuilder

* Fix mixed declaration issue

* Add fastcover to symbol.c

* Add fastCover.c and cover.h to build

* Change fastCover.c to fastcover.c

* Update benchmark to run FASTCOVER in dictBuilder

* Undo spliting fastcover_param into cover_param and f

* Remove convert param functions

* Assign f to parameter

* Add zdict.h to Makefile in lib

* Add cover.h to BUCK

* Cast 1 to U64 before shifting

* Remove trimming of zero freq head and tail in selectSegment and rebenchmark

* Remove f as a separate parameter of tryParam

* Read 8 bytes when d is 6

* Add trimming off zero frequency head and tail

* Use best functions from COVER and remove trimming part(which leads to worse compression ratio after previous bugs were fixed)

* Add finalize= argument to FASTCOVER to specify percentage of training samples passed to ZDICT_finalizeDictionary

* Change nbDmer to always read 8 bytes even when d=6

* Add skip=# argument to allow skipping dmers in computeFrequency in FASTCOVER

* Update comments and benchmarking result

* Change default method of ZDICT_trainFromBuffer to ZDICT_optimizeTrainFromBuffer_fastCover

* Add dictType enum and fix bug about passing zParam when converting to coverParam

* Combine finalize and skip into a single parameter

* Update acceleration parameters and benchmark on 3 sample sets

* Change default splitPoint of FASTCOVER to 0.75 and benchmark first 3 sample sets

* Initialize variables outside of for loop in benchmark.c

* Update benchmark result for hg-manifest

* Remove cover.h from install-includes

* Add explanation of f

* Set default compression level for trainFromBuffer to 3

* Add assertion of fastCoverParams in DiB_trainFromFiles

* Add checkTotalCompressedSize function + some minor fixes

* Add test for multithreading fastCovr

* Initialize segmentFreqs in every FASTCOVER_selectSegment and move mutex_unnlock to end of COVER_best_finish

* Free segmentFreqs

* Initialize segmentFreqs before calling FASTCOVER_buildDictionary instead of in FASTCOVER_selectSegment

* Add FASTCOVER_MEMMULT

* Minor fix

* Update benchmarking result
2018-08-23 12:06:20 -07:00