9d6ed9def3
* Minor fix * Run non-optimize FASTCOVER 5 times in benchmark * Merge fastCover into dictBuilder * Fix mixed declaration issue * Add fastcover to symbol.c * Add fastCover.c and cover.h to build * Change fastCover.c to fastcover.c * Update benchmark to run FASTCOVER in dictBuilder * Undo spliting fastcover_param into cover_param and f * Remove convert param functions * Assign f to parameter * Add zdict.h to Makefile in lib * Add cover.h to BUCK * Cast 1 to U64 before shifting * Remove trimming of zero freq head and tail in selectSegment and rebenchmark * Remove f as a separate parameter of tryParam * Read 8 bytes when d is 6 * Add trimming off zero frequency head and tail * Use best functions from COVER and remove trimming part(which leads to worse compression ratio after previous bugs were fixed) * Add finalize= argument to FASTCOVER to specify percentage of training samples passed to ZDICT_finalizeDictionary * Change nbDmer to always read 8 bytes even when d=6 * Add skip=# argument to allow skipping dmers in computeFrequency in FASTCOVER * Update comments and benchmarking result * Change default method of ZDICT_trainFromBuffer to ZDICT_optimizeTrainFromBuffer_fastCover * Add dictType enum and fix bug about passing zParam when converting to coverParam * Combine finalize and skip into a single parameter * Update acceleration parameters and benchmark on 3 sample sets * Change default splitPoint of FASTCOVER to 0.75 and benchmark first 3 sample sets * Initialize variables outside of for loop in benchmark.c * Update benchmark result for hg-manifest * Remove cover.h from install-includes * Add explanation of f * Set default compression level for trainFromBuffer to 3 * Add assertion of fastCoverParams in DiB_trainFromFiles * Add checkTotalCompressedSize function + some minor fixes * Add test for multithreading fastCovr * Initialize segmentFreqs in every FASTCOVER_selectSegment and move mutex_unnlock to end of COVER_best_finish * Free segmentFreqs * Initialize segmentFreqs before calling FASTCOVER_buildDictionary instead of in FASTCOVER_selectSegment * Add FASTCOVER_MEMMULT * Minor fix * Update benchmarking result |
||
|---|---|---|
| .. | ||
| .gitignore | ||
| cmake_uninstall.cmake.in | ||
| CMakeLists.txt | ||
| pkgconfig.cmake | ||